Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948558.1_cds_XP_016489785.1_80273
CDS Infomation

[gene=LOC107809641] [db_xref=GeneID:107809641] [protein=kinesin-1-like protein PSS1] [protein_id=XP_016489785.1] [location=join(24618..24731,24879..24981,25089..25132,25546..25575,25649..25771,25902..25927,26048..26129,26508..26549,26628..26661,26763..26838,26905..27124,27207..27298,29556..29670,29747..29926,30661..30759)] [gbkey=CDS]
Sequence

ATGTCGAATATGAAAGTTTGCGCGCTATTCAGACCTCTGAATTCGAAGGAACTCTCTGAG
TTTGGCGATGCTGTCTCTGTTCAAGGCATTACCTCTGAGTCCTTCATAATTAAGGATGAA
AAGGAACAGGAATTTGATTTTACGTTCGACAGAGTTTTCTATCAAGGATCTGAACAAGCT
GATATATACGAATTTCTAGCTCTGCCTATAGTCCAAGGTGCTGTAGATGCAATAAATGGT
ACGATTATCACTTATGGACAGACCGGAGCAGGAAAGACATATAGCATGGAGGGACCAAGC
ATTGTAGATTGTGAAAGCAAGAACAAAGGACTATTGCAGAGGGTAGTGGATGGACTTTTT
GAGGCCATAATGACTTCAGAGAAACCAATCAAATACACAATCAAATTATCAATGGTAGAG
ATCTACATGGAGAAAGTAAGGGATCTCCTCGATTTATCGAAGGACAATATACAGATAAAG
GAGAGTAAAGTACATGGAATAATTCTAAGTGGAGCAACAGAAGTAGCTATATCCAACACT
GCAGAAGCATTACAAAGCTTATCAAGTGGGATAGCTAATAGAGCAGTTGGAGAAACACAA
ATGAATATGTCAAGCAGCAGAAGCCATTGCCTTTACATTTTTACTGTCCACCAGGAGCTG
ACAAAGGATAAAAGGACCAAATTTGGAAAGCTGATACTCGTTGACTTGGCTGGGTCTGAA
AAAGTTGATAAGACCGGAGCTGAAGGTAAAATTCTTGAAGAAGCAAAGACCATCAATCAG
TCCCTCACAGCACTTGGGAAAGTGATAAATGCTATGACTAGCAGTGCTCCAGGAAAGCCA
ACTCATATTCCTTATCGTGATTCTAAGCTCACTCGGATCCTACAAGATGCTCTTGGGGGA
TACTCTCAGACTGCATTACTTTGCTGTTGCTCTCCGAGCCCTTACAATGCTTCAGAGAGC
CTCTTCACCCTGCGATTCGGTGCTAGAGCAAAGCATATAAAGGCAACAGTACATGTTAGT
TGCAAGGAAGATCTAGACAATAACAAGGAAGCAATCGTCTCAACCAATGTAGATGAGTCC
AGGGAGAGGATATTGGAAAAGATGAGAGAGAGAATAACTGCCGAAGATGTTAAATTGCTT
GAGGAATTATTTGTACTGGAGGGGATTCTCTTTGATCCCAATTCAGTTGAGGAGATAGAA
GTTGCGTATGAAGATATTACGTCAAGGACAATCTCATCATTATATAAAATCGTGGAAGAG
CTGAGTACAGTTGCGGAGAAGTTAAAGAGGGAGAATGCCGCTCTTAAGGCCAGCTTGAAA
GCTTCTGAAGAGTCTTATCTACATCAACTCGATAGAAGGCCGCTCTGCTTGATTCTCTGA

Peptide Sequence

PEP ID

XP_016489785.1
PEP Infomation

PREDICTED: kinesin-1-like protein PSS1 [Nicotiana tabacum]
Sequence

MSNMKVCALFRPLNSKELSEFGDAVSVQGITSESFIIKDEKEQEFDFTFDRVFYQGSEQA
DIYEFLALPIVQGAVDAINGTIITYGQTGAGKTYSMEGPSIVDCESKNKGLLQRVVDGLF
EAIMTSEKPIKYTIKLSMVEIYMEKVRDLLDLSKDNIQIKESKVHGIILSGATEVAISNT
AEALQSLSSGIANRAVGETQMNMSSSRSHCLYIFTVHQELTKDKRTKFGKLILVDLAGSE
KVDKTGAEGKILEEAKTINQSLTALGKVINAMTSSAPGKPTHIPYRDSKLTRILQDALGG
YSQTALLCCCSPSPYNASESLFTLRFGARAKHIKATVHVSCKEDLDNNKEAIVSTNVDES
RERILEKMRERITAEDVKLLEELFVLEGILFDPNSVEEIEVAYEDITSRTISSLYKIVEE
LSTVAEKLKRENAALKASLKASEESYLHQLDRRPLCLIL

Transcript Sequence

Gene sequence data has not been registered.